Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gm24158-201ENSMUST00000175263 71 ntBASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Mir125a-201ENSMUST00000083545 68 ntBASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5-4A0A075B652 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Gm18766-201ENSMUST00000189811 808 ntBASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5-4A0A075B652 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Gm9719-201ENSMUST00000162765 543 ntBASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5-4A0A075B652 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5-4A0A075B652 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms