Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Tcf21-202ENSMUST00000218002 1788 ntBASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trav8-1A0A075B641 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm9252-201ENSMUST00000172364 1602 ntBASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm13464-201ENSMUST00000119418 935 ntBASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm12644-201ENSMUST00000119935 606 ntBASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm7899-201ENSMUST00000192935 1897 ntBASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Gm12020-201ENSMUST00000119030 2042 ntBASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trav8-1A0A075B641 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 AC131743.5-201ENSMUST00000220775 1618 ntBASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Trav8-1A0A075B641 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms