Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Gm7899-201ENSMUST00000192935 1897 ntBASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Lgr5Q9Z1P4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Gm7783-201ENSMUST00000204795 781 ntBASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Olfr284-202ENSMUST00000206647 966 ntBASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Gm6334-201ENSMUST00000207083 228 ntBASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.32■□□□□ 0.2
Lgr5Q9Z1P4 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Gm11658-201ENSMUST00000120913 1008 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Gm2467-201ENSMUST00000182266 1010 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Gm6981-201ENSMUST00000182467 1008 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Gm27243-201ENSMUST00000183964 521 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Gm44069-201ENSMUST00000204898 506 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Cts7-204ENSMUST00000225321 1257 ntBASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lgr5Q9Z1P4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.3■□□□□ 0.2
Lgr5Q9Z1P4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Lgr5Q9Z1P4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms