Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssr1Q9CY50 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ssr1Q9CY50 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ssr1Q9CY50 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.96□□□□□ -0.02
Ssr1Q9CY50 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ssr1Q9CY50 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ssr1Q9CY50 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ssr1Q9CY50 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
Ssr1Q9CY50 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.96□□□□□ -0.02
Ssr1Q9CY50 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ssr1Q9CY50 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ssr1Q9CY50 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm11594-201ENSMUST00000122313 162 ntBASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm25911-201ENSMUST00000157621 56 ntBASIC14.95□□□□□ -0.02
Ssr1Q9CY50 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ssr1Q9CY50 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm4995-201ENSMUST00000117247 432 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm13365-201ENSMUST00000121188 973 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Mir1895-201ENSMUST00000122615 79 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm29310-201ENSMUST00000185468 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21825-201ENSMUST00000185728 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm29109-201ENSMUST00000185895 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21896-201ENSMUST00000186520 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21873-201ENSMUST00000186728 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21794-201ENSMUST00000187056 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21880-201ENSMUST00000187275 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21826-201ENSMUST00000187451 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21198-201ENSMUST00000188393 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21749-201ENSMUST00000189343 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21901-201ENSMUST00000189568 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm29424-201ENSMUST00000189716 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm28599-201ENSMUST00000189838 694 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21867-201ENSMUST00000189917 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm29269-201ENSMUST00000190087 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21722-201ENSMUST00000190153 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm28423-201ENSMUST00000190701 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21899-201ENSMUST00000190745 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21910-201ENSMUST00000191163 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21849-201ENSMUST00000191571 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm28678-201ENSMUST00000191593 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm20910-201ENSMUST00000193268 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Gm21871-201ENSMUST00000194621 696 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ssr1Q9CY50 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms