Protein–RNA interactions for Protein: Q99PV5

Bhlhe41, Class E basic helix-loop-helix protein 41, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe41Q99PV5 Gm21470-201ENSMUST00000187680 696 ntBASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Bhlhe41Q99PV5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Gm29741-201ENSMUST00000192667 421 ntBASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Bhlhe41Q99PV5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Gm15393-201ENSMUST00000120499 219 ntBASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Bhlhe41Q99PV5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Gm12585-201ENSMUST00000117307 290 ntBASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Gm4875-201ENSMUST00000118257 786 ntBASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Mir497b-201ENSMUST00000093601 125 ntBASIC12.53□□□□□ -0.4
Bhlhe41Q99PV5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms