Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm4986-201ENSMUST00000119731 549 ntBASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm11591-201ENSMUST00000120063 702 ntBASIC16.87■□□□□ 0.29
RtcbQ99LF4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm8584-201ENSMUST00000171982 758 ntBASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm20482-202ENSMUST00000174729 825 ntBASIC16.87■□□□□ 0.29
RtcbQ99LF4 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.87■□□□□ 0.29
RtcbQ99LF4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Gm2383-201ENSMUST00000181461 807 ntBASIC16.86■□□□□ 0.29
RtcbQ99LF4 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.86■□□□□ 0.29
RtcbQ99LF4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RtcbQ99LF4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Gm12997-201ENSMUST00000120207 640 ntBASIC16.85■□□□□ 0.29
RtcbQ99LF4 Mospd4-201ENSMUST00000180618 576 ntBASIC16.85■□□□□ 0.29
RtcbQ99LF4 Gm2445-201ENSMUST00000182798 989 ntBASIC16.85■□□□□ 0.29
RtcbQ99LF4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RtcbQ99LF4 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.85■□□□□ 0.29
RtcbQ99LF4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RtcbQ99LF4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms