Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm5687-201ENSMUST00000118252 640 ntBASIC16.19■□□□□ 0.18
Col20a1Q923P0 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.19■□□□□ 0.18
Col20a1Q923P0 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm29608-201ENSMUST00000190444 463 ntBASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.19■□□□□ 0.18
Col20a1Q923P0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.19■□□□□ 0.18
Col20a1Q923P0 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col20a1Q923P0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.18■□□□□ 0.18
Col20a1Q923P0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.18■□□□□ 0.18
Col20a1Q923P0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.18■□□□□ 0.18
Col20a1Q923P0 AY702102-202ENSMUST00000194651 1173 ntBASIC16.18■□□□□ 0.18
Col20a1Q923P0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Gm6091-201ENSMUST00000098307 165 ntBASIC16.18■□□□□ 0.18
Col20a1Q923P0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Col20a1Q923P0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Mir1982-201ENSMUST00000157368 74 ntBASIC16.17■□□□□ 0.18
Col20a1Q923P0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Itm2b-204ENSMUST00000228637 783 ntBASIC16.17■□□□□ 0.18
Col20a1Q923P0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
Col20a1Q923P0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col20a1Q923P0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col20a1Q923P0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Col20a1Q923P0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Col20a1Q923P0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col20a1Q923P0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col20a1Q923P0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms