Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhb3Q91XZ7 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Mir1895-201ENSMUST00000122615 79 ntBASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Thap2-203ENSMUST00000218989 527 ntBASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhb3Q91XZ7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Gm27494-201ENSMUST00000184735 189 ntBASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Gm28975-201ENSMUST00000186412 686 ntBASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Gm45612-201ENSMUST00000211320 160 ntBASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhb3Q91XZ7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhb3Q91XZ7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms