Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdh18Q8VHR0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm15483-201ENSMUST00000120338 456 ntBASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm17271-201ENSMUST00000165535 355 ntBASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdh18Q8VHR0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Mir3113-201ENSMUST00000175478 76 ntBASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Gm37230-201ENSMUST00000194491 818 ntBASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdh18Q8VHR0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms