Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cystm1Q8K353 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cystm1Q8K353 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cystm1Q8K353 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cystm1Q8K353 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cystm1Q8K353 Gm15889-202ENSMUST00000212669 2443 ntBASIC8.65□□□□□ -1.02
Cystm1Q8K353 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cystm1Q8K353 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cystm1Q8K353 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Gm45242-201ENSMUST00000210666 2129 ntBASIC8.65□□□□□ -1.03
Cystm1Q8K353 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cystm1Q8K353 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gm5939-201ENSMUST00000119613 2874 ntBASIC8.64□□□□□ -1.03
Cystm1Q8K353 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Best4-ps-201ENSMUST00000129783 1380 ntBASIC8.64□□□□□ -1.03
Cystm1Q8K353 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gm17271-201ENSMUST00000165535 355 ntBASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gm27300-201ENSMUST00000184085 97 ntBASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gm27335-201ENSMUST00000184758 97 ntBASIC8.64□□□□□ -1.03
Cystm1Q8K353 Mir7036b-201ENSMUST00000184791 63 ntBASIC8.64□□□□□ -1.03
Cystm1Q8K353 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gm10176-201ENSMUST00000159707 2264 ntBASIC8.64□□□□□ -1.03
Cystm1Q8K353 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cystm1Q8K353 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cystm1Q8K353 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cystm1Q8K353 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms