Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Gm14057-201ENSMUST00000120631 482 ntBASIC13.15□□□□□ -0.3
CroccQ8CJ40 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Gm44855-201ENSMUST00000205725 362 ntBASIC13.15□□□□□ -0.3
CroccQ8CJ40 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CroccQ8CJ40 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CroccQ8CJ40 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Gm21470-201ENSMUST00000187680 696 ntBASIC13.14□□□□□ -0.31
CroccQ8CJ40 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Gm6218-201ENSMUST00000219812 628 ntBASIC13.14□□□□□ -0.31
CroccQ8CJ40 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CroccQ8CJ40 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm12151-201ENSMUST00000121374 290 ntBASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm15487-201ENSMUST00000122373 465 ntBASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.13□□□□□ -0.31
CroccQ8CJ40 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CroccQ8CJ40 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CroccQ8CJ40 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms