Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Gm15460-201ENSMUST00000118147 391 ntBASIC17.01■□□□□ 0.31
Smc5Q8CG46 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Smc5Q8CG46 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Gm11557-201ENSMUST00000120200 1008 ntBASIC17■□□□□ 0.31
Smc5Q8CG46 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Gm8927-201ENSMUST00000181978 981 ntBASIC17■□□□□ 0.31
Smc5Q8CG46 Gm21470-201ENSMUST00000187680 696 ntBASIC17■□□□□ 0.31
Smc5Q8CG46 AC153872.1-201ENSMUST00000199539 128 ntBASIC17■□□□□ 0.31
Smc5Q8CG46 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17■□□□□ 0.31
Smc5Q8CG46 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17■□□□□ 0.31
Smc5Q8CG46 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Gm3222-201ENSMUST00000071282 990 ntBASIC17■□□□□ 0.31
Smc5Q8CG46 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17■□□□□ 0.31
Smc5Q8CG46 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Smc5Q8CG46 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Gm15678-201ENSMUST00000117573 960 ntBASIC16.99■□□□□ 0.31
Smc5Q8CG46 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Smc5Q8CG46 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.99■□□□□ 0.31
Smc5Q8CG46 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.99■□□□□ 0.31
Smc5Q8CG46 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Smc5Q8CG46 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Smc5Q8CG46 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms