Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Gm2272-201ENSMUST00000194903 582 ntBASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tsen54Q8C2A2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm17271-201ENSMUST00000165535 355 ntBASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm2213-201ENSMUST00000197485 688 ntBASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Pck2-205ENSMUST00000226352 2784 ntBASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tsen54Q8C2A2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tsen54Q8C2A2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms