Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Gm2423-201ENSMUST00000074863 733 ntBASIC12.25□□□□□ -0.45
Ube3dQ8BX13 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ube3dQ8BX13 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.24□□□□□ -0.45
Ube3dQ8BX13 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Gm16215-201ENSMUST00000161990 637 ntBASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.24□□□□□ -0.45
Ube3dQ8BX13 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Gm7730-201ENSMUST00000212486 454 ntBASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Mir125a-201ENSMUST00000083545 68 ntBASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ube3dQ8BX13 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Syt7-204ENSMUST00000223586 1344 ntBASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 AA619741-201ENSMUST00000195095 646 ntBASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ube3dQ8BX13 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.23□□□□□ -0.45
Ube3dQ8BX13 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms