Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Gm7230-201ENSMUST00000173026 815 ntBASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Gm37230-201ENSMUST00000194491 818 ntBASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Gm10154-201ENSMUST00000084445 354 ntBASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smco3Q8BQM7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smco3Q8BQM7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.3□□□□□ -0.6
Smco3Q8BQM7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Smco3Q8BQM7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms