Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdhr3Q8BL00 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Gm18889-201ENSMUST00000174284 929 ntBASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.01□□□□□ -0.49
Cdhr3Q8BL00 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Gm4913-201ENSMUST00000117075 1290 ntBASIC12□□□□□ -0.49
Cdhr3Q8BL00 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Gm27494-201ENSMUST00000184735 189 ntBASIC12□□□□□ -0.49
Cdhr3Q8BL00 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 AC131710.1-201ENSMUST00000228336 990 ntBASIC12□□□□□ -0.49
Cdhr3Q8BL00 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12□□□□□ -0.49
Cdhr3Q8BL00 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdhr3Q8BL00 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdhr3Q8BL00 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms