Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Mir125a-201ENSMUST00000083545 68 ntBASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccdc40Q8BI79 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm23935-201ENSMUST00000102303 57 ntBASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm24270-201ENSMUST00000102326 57 ntBASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm15693-201ENSMUST00000120470 637 ntBASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm24245-201ENSMUST00000157318 57 ntBASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm26308-201ENSMUST00000157768 69 ntBASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc40Q8BI79 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Gm43575-201ENSMUST00000196420 516 ntBASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc40Q8BI79 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms