Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Gm42550-201ENSMUST00000201553 960 ntBASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Gm7287-201ENSMUST00000205267 602 ntBASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ubfd1Q78JW9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm13829-201ENSMUST00000119600 138 ntBASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Gm17330-201ENSMUST00000221047 165 ntBASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.37□□□□□ -0.27
Ubfd1Q78JW9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Gm4984-201ENSMUST00000115987 360 ntBASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ubfd1Q78JW9 Gm27486-201ENSMUST00000184923 80 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms