Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Gm14701-201ENSMUST00000117156 348 ntBASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Mir497b-201ENSMUST00000093601 125 ntBASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt39Q6IFX4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Krt39Q6IFX4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Krt39Q6IFX4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
Krt39Q6IFX4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Krt39Q6IFX4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.21■□□□□ 0.02
Krt39Q6IFX4 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt39Q6IFX4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.2■□□□□ 0.02
Krt39Q6IFX4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Gm25925-201ENSMUST00000158314 306 ntBASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Gm18041-201ENSMUST00000218210 618 ntBASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt39Q6IFX4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Gm43125-201ENSMUST00000201724 730 ntBASIC15.19■□□□□ 0.02
Krt39Q6IFX4 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krt39Q6IFX4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Gm5566-201ENSMUST00000116118 459 ntBASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.18■□□□□ 0.02
Krt39Q6IFX4 Gm9719-201ENSMUST00000162765 543 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms