Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Traf3Q60803 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.38□□□□□ -0.11
Traf3Q60803 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.38□□□□□ -0.11
Traf3Q60803 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.38□□□□□ -0.11
Traf3Q60803 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Traf3Q60803 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Traf3Q60803 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.38□□□□□ -0.11
Traf3Q60803 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.38□□□□□ -0.11
Traf3Q60803 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Gm43094-201ENSMUST00000196549 921 ntBASIC14.38□□□□□ -0.11
Traf3Q60803 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.38□□□□□ -0.11
Traf3Q60803 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Traf3Q60803 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Traf3Q60803 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.38□□□□□ -0.11
Traf3Q60803 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.38□□□□□ -0.11
Traf3Q60803 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Traf3Q60803 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Traf3Q60803 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Traf3Q60803 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.37□□□□□ -0.11
Traf3Q60803 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.37□□□□□ -0.11
Traf3Q60803 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.37□□□□□ -0.11
Traf3Q60803 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Gm19078-201ENSMUST00000206311 727 ntBASIC14.37□□□□□ -0.11
Traf3Q60803 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.37□□□□□ -0.11
Traf3Q60803 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Traf3Q60803 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.37□□□□□ -0.11
Traf3Q60803 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Traf3Q60803 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Traf3Q60803 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.36□□□□□ -0.11
Traf3Q60803 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.36□□□□□ -0.11
Traf3Q60803 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Traf3Q60803 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.36□□□□□ -0.11
Traf3Q60803 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms