Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Nr1h4Q60641 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.1□□□□□ -0.31
Nr1h4Q60641 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.1□□□□□ -0.31
Nr1h4Q60641 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Mir3113-201ENSMUST00000175478 76 ntBASIC13.1□□□□□ -0.31
Nr1h4Q60641 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nr1h4Q60641 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm13823-201ENSMUST00000119930 345 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm6222-201ENSMUST00000120787 396 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm1401-201ENSMUST00000122048 772 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm29741-201ENSMUST00000192667 421 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Gm45612-201ENSMUST00000211320 160 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Nr1h4Q60641 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.09□□□□□ -0.31
Nr1h4Q60641 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nr1h4Q60641 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nr1h4Q60641 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.08□□□□□ -0.31
Nr1h4Q60641 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nr1h4Q60641 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nr1h4Q60641 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nr1h4Q60641 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.08□□□□□ -0.32
Nr1h4Q60641 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.08□□□□□ -0.32
Nr1h4Q60641 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.08□□□□□ -0.32
Nr1h4Q60641 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.08□□□□□ -0.32
Nr1h4Q60641 Mzt1-203ENSMUST00000227948 952 ntBASIC13.08□□□□□ -0.32
Nr1h4Q60641 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nr1h4Q60641 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms