Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
Rc3h1Q4VGL6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Gm44397-201ENSMUST00000195950 113 ntBASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Gm42550-201ENSMUST00000201553 960 ntBASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rc3h1Q4VGL6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm11425-201ENSMUST00000119608 498 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm12403-201ENSMUST00000121384 959 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm17794-201ENSMUST00000220252 955 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm9396-201ENSMUST00000076703 567 ntBASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.84■□□□□ 0.13
Rc3h1Q4VGL6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
Rc3h1Q4VGL6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rc3h1Q4VGL6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.83■□□□□ 0.13
Rc3h1Q4VGL6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Gm15770-201ENSMUST00000117498 584 ntBASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Gm15824-201ENSMUST00000119516 955 ntBASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Gm7561-201ENSMUST00000211203 886 ntBASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms