Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Fam196aQ3USH1 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Gm14277-201ENSMUST00000121195 360 ntBASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Gm38144-201ENSMUST00000192790 465 ntBASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Fam196aQ3USH1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gm14028-201ENSMUST00000117434 479 ntBASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gm7593-201ENSMUST00000187246 644 ntBASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.73□□□□□ -0.21
Fam196aQ3USH1 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Fam196aQ3USH1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms