Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.45□□□□□ -0.58
Tff1Q08423 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.45□□□□□ -0.58
Tff1Q08423 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.45□□□□□ -0.58
Tff1Q08423 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Tff1Q08423 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tff1Q08423 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tff1Q08423 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tff1Q08423 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.45□□□□□ -0.58
Tff1Q08423 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.44□□□□□ -0.58
Tff1Q08423 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tff1Q08423 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.44□□□□□ -0.58
Tff1Q08423 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.44□□□□□ -0.58
Tff1Q08423 Gm17837-201ENSMUST00000186435 985 ntBASIC11.44□□□□□ -0.58
Tff1Q08423 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tff1Q08423 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tff1Q08423 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.43□□□□□ -0.58
Tff1Q08423 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Tff1Q08423 Gm14127-201ENSMUST00000117906 678 ntBASIC11.43□□□□□ -0.58
Tff1Q08423 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Mir8102-201ENSMUST00000184148 139 ntBASIC11.43□□□□□ -0.58
Tff1Q08423 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.43□□□□□ -0.58
Tff1Q08423 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.43□□□□□ -0.58
Tff1Q08423 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Tff1Q08423 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Tff1Q08423 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms