Protein–RNA interactions for Protein: P85442

Vgll3, Transcription cofactor vestigial-like protein 3, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll3P85442 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC14.1□□□□□ -0.15
Vgll3P85442 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vgll3P85442 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Gm25925-201ENSMUST00000158314 306 ntBASIC14.1□□□□□ -0.15
Vgll3P85442 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Vgll3P85442 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.1□□□□□ -0.15
Vgll3P85442 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vgll3P85442 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC14.1□□□□□ -0.15
Vgll3P85442 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Vgll3P85442 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vgll3P85442 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.09□□□□□ -0.15
Vgll3P85442 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Vgll3P85442 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vgll3P85442 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.09□□□□□ -0.15
Vgll3P85442 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vgll3P85442 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Gm6345-202ENSMUST00000180900 204 ntBASIC14.09□□□□□ -0.15
Vgll3P85442 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.09□□□□□ -0.15
Vgll3P85442 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.09□□□□□ -0.15
Vgll3P85442 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Vgll3P85442 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.09□□□□□ -0.15
Vgll3P85442 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Vgll3P85442 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Vgll3P85442 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vgll3P85442 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vgll3P85442 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vgll3P85442 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vgll3P85442 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vgll3P85442 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Vgll3P85442 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.08□□□□□ -0.15
Vgll3P85442 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Vgll3P85442 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Vgll3P85442 Gm17980-201ENSMUST00000217977 2349 ntBASIC14.08□□□□□ -0.16
Vgll3P85442 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vgll3P85442 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.08□□□□□ -0.16
Vgll3P85442 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Gm21362-201ENSMUST00000194272 928 ntBASIC14.08□□□□□ -0.16
Vgll3P85442 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Vgll3P85442 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.08□□□□□ -0.16
Vgll3P85442 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Vgll3P85442 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms