Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hmgb1P63158 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.15■□□□□ 0.02
Hmgb1P63158 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.15■□□□□ 0.02
Hmgb1P63158 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.15■□□□□ 0.02
Hmgb1P63158 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Hmgb1P63158 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hmgb1P63158 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Gm8410-201ENSMUST00000117225 605 ntBASIC15.14■□□□□ 0.01
Hmgb1P63158 Gm15460-201ENSMUST00000118147 391 ntBASIC15.14■□□□□ 0.01
Hmgb1P63158 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.14■□□□□ 0.01
Hmgb1P63158 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.14■□□□□ 0.01
Hmgb1P63158 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmgb1P63158 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgb1P63158 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Mir1897-201ENSMUST00000122581 272 ntBASIC15.13■□□□□ 0.01
Hmgb1P63158 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hmgb1P63158 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hmgb1P63158 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Gm27622-201ENSMUST00000183779 60 ntBASIC15.13■□□□□ 0.01
Hmgb1P63158 Gm21470-201ENSMUST00000187680 696 ntBASIC15.13■□□□□ 0.01
Hmgb1P63158 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.13■□□□□ 0.01
Hmgb1P63158 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Mir497b-201ENSMUST00000093601 125 ntBASIC15.13■□□□□ 0.01
Hmgb1P63158 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hmgb1P63158 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgb1P63158 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgb1P63158 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hmgb1P63158 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgb1P63158 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgb1P63158 Gm25144-201ENSMUST00000179561 110 ntBASIC15.12■□□□□ 0.01
Hmgb1P63158 Gm25352-201ENSMUST00000179815 110 ntBASIC15.12■□□□□ 0.01
Hmgb1P63158 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgb1P63158 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms