Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm45242-201ENSMUST00000210666 2129 ntBASIC9.8□□□□□ -0.84
Rpl39P62892 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Gm13410-201ENSMUST00000117058 1415 ntBASIC9.8□□□□□ -0.84
Rpl39P62892 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Rpl39P62892 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39P62892 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39P62892 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Gm24589-201ENSMUST00000116692 94 ntBASIC9.79□□□□□ -0.84
Rpl39P62892 Gm9385-201ENSMUST00000117563 472 ntBASIC9.79□□□□□ -0.84
Rpl39P62892 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpl39P62892 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.79□□□□□ -0.84
Rpl39P62892 Gm27920-201ENSMUST00000183953 96 ntBASIC9.79□□□□□ -0.84
Rpl39P62892 Gm27628-201ENSMUST00000184911 107 ntBASIC9.79□□□□□ -0.84
Rpl39P62892 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC9.79□□□□□ -0.84
Rpl39P62892 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpl39P62892 CT030704.2-201ENSMUST00000228887 494 ntBASIC9.79□□□□□ -0.84
Rpl39P62892 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
Rpl39P62892 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.79□□□□□ -0.84
Rpl39P62892 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39P62892 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39P62892 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Rpl39P62892 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Rpl39P62892 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.78□□□□□ -0.84
Rpl39P62892 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Gm5712-201ENSMUST00000199748 1043 ntBASIC9.78□□□□□ -0.84
Rpl39P62892 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC9.78□□□□□ -0.84
Rpl39P62892 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rpl39P62892 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rpl39P62892 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms