Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm25911-201ENSMUST00000157621 56 ntBASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm6916-202ENSMUST00000205523 195 ntBASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm18206-201ENSMUST00000207027 926 ntBASIC13.18□□□□□ -0.3
Cdkn2bP55271 Gm16476-201ENSMUST00000221544 139 ntBASIC13.18□□□□□ -0.3
Cdkn2bP55271 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdkn2bP55271 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Mir1895-201ENSMUST00000122615 79 ntBASIC13.17□□□□□ -0.3
Cdkn2bP55271 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Gm27741-201ENSMUST00000185060 237 ntBASIC13.17□□□□□ -0.3
Cdkn2bP55271 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.17□□□□□ -0.3
Cdkn2bP55271 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.17□□□□□ -0.3
Cdkn2bP55271 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.17□□□□□ -0.3
Cdkn2bP55271 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdkn2bP55271 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.16□□□□□ -0.3
Cdkn2bP55271 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.16□□□□□ -0.3
Cdkn2bP55271 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdkn2bP55271 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.16□□□□□ -0.3
Cdkn2bP55271 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.16□□□□□ -0.3
Cdkn2bP55271 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.16□□□□□ -0.3
Cdkn2bP55271 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdkn2bP55271 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms