Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Gm43125-201ENSMUST00000201724 730 ntBASIC13.28□□□□□ -0.28
Tnfsf4P43488 Dupd1-202ENSMUST00000224735 548 ntBASIC13.28□□□□□ -0.28
Tnfsf4P43488 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfsf4P43488 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfsf4P43488 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Gm4995-201ENSMUST00000117247 432 ntBASIC13.27□□□□□ -0.29
Tnfsf4P43488 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Gm6916-202ENSMUST00000205523 195 ntBASIC13.27□□□□□ -0.29
Tnfsf4P43488 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.27□□□□□ -0.29
Tnfsf4P43488 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tnfsf4P43488 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.26□□□□□ -0.29
Tnfsf4P43488 Gm44771-201ENSMUST00000206975 626 ntBASIC13.26□□□□□ -0.29
Tnfsf4P43488 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms