Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.94□□□□□ -0.34
Sox6P40645 Gm27359-201ENSMUST00000184153 110 ntBASIC12.94□□□□□ -0.34
Sox6P40645 Gm27785-201ENSMUST00000184268 110 ntBASIC12.94□□□□□ -0.34
Sox6P40645 Gm27466-201ENSMUST00000184396 110 ntBASIC12.94□□□□□ -0.34
Sox6P40645 Gm27703-201ENSMUST00000184836 110 ntBASIC12.94□□□□□ -0.34
Sox6P40645 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox6P40645 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.94□□□□□ -0.34
Sox6P40645 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.94□□□□□ -0.34
Sox6P40645 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.94□□□□□ -0.34
Sox6P40645 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox6P40645 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Sox6P40645 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sox6P40645 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.94□□□□□ -0.34
Sox6P40645 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.94□□□□□ -0.34
Sox6P40645 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sox6P40645 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.93□□□□□ -0.34
Sox6P40645 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.93□□□□□ -0.34
Sox6P40645 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sox6P40645 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Sox6P40645 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sox6P40645 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Sox6P40645 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.93□□□□□ -0.34
Sox6P40645 Gm25925-201ENSMUST00000158314 306 ntBASIC12.93□□□□□ -0.34
Sox6P40645 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.93□□□□□ -0.34
Sox6P40645 Gm7774-201ENSMUST00000200064 533 ntBASIC12.93□□□□□ -0.34
Sox6P40645 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox6P40645 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Sox6P40645 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox6P40645 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox6P40645 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Sox6P40645 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox6P40645 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox6P40645 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.92□□□□□ -0.34
Sox6P40645 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox6P40645 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.92□□□□□ -0.34
Sox6P40645 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox6P40645 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox6P40645 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox6P40645 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox6P40645 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox6P40645 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox6P40645 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox6P40645 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox6P40645 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox6P40645 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms