Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.18□□□□□ -0.3
Cdh4P39038 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Gm24420-201ENSMUST00000176676 59 ntBASIC13.18□□□□□ -0.3
Cdh4P39038 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.18□□□□□ -0.3
Cdh4P39038 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Gm17795-201ENSMUST00000214505 757 ntBASIC13.18□□□□□ -0.3
Cdh4P39038 Gm6218-201ENSMUST00000219812 628 ntBASIC13.18□□□□□ -0.3
Cdh4P39038 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.18□□□□□ -0.3
Cdh4P39038 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cdh4P39038 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cdh4P39038 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cdh4P39038 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdh4P39038 Gm7488-201ENSMUST00000117148 684 ntBASIC13.17□□□□□ -0.3
Cdh4P39038 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
Cdh4P39038 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.17□□□□□ -0.3
Cdh4P39038 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Cdh4P39038 Gm18905-201ENSMUST00000205454 928 ntBASIC13.17□□□□□ -0.3
Cdh4P39038 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdh4P39038 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.17□□□□□ -0.3
Cdh4P39038 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.17□□□□□ -0.3
Cdh4P39038 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cdh4P39038 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.17□□□□□ -0.3
Cdh4P39038 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.17□□□□□ -0.3
Cdh4P39038 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Cdh4P39038 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cdh4P39038 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Gm2445-201ENSMUST00000182798 989 ntBASIC13.16□□□□□ -0.3
Cdh4P39038 Gm42612-201ENSMUST00000197986 623 ntBASIC13.16□□□□□ -0.3
Cdh4P39038 Gm43170-201ENSMUST00000199827 612 ntBASIC13.16□□□□□ -0.3
Cdh4P39038 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdh4P39038 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.16□□□□□ -0.3
Cdh4P39038 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdh4P39038 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.16□□□□□ -0.3
Cdh4P39038 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cdh4P39038 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.16□□□□□ -0.3
Cdh4P39038 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh4P39038 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms