Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.71□□□□□ -0.21
LdlrP35951 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LdlrP35951 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LdlrP35951 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LdlrP35951 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
LdlrP35951 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LdlrP35951 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LdlrP35951 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
LdlrP35951 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.7□□□□□ -0.22
LdlrP35951 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.7□□□□□ -0.22
LdlrP35951 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LdlrP35951 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Gm2810-201ENSMUST00000118681 990 ntBASIC13.7□□□□□ -0.22
LdlrP35951 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.7□□□□□ -0.22
LdlrP35951 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.7□□□□□ -0.22
LdlrP35951 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.7□□□□□ -0.22
LdlrP35951 Mir7684-201ENSMUST00000183858 60 ntBASIC13.7□□□□□ -0.22
LdlrP35951 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.7□□□□□ -0.22
LdlrP35951 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.7□□□□□ -0.22
LdlrP35951 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.7□□□□□ -0.22
LdlrP35951 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LdlrP35951 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LdlrP35951 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
LdlrP35951 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
LdlrP35951 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.69□□□□□ -0.22
LdlrP35951 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.69□□□□□ -0.22
LdlrP35951 Gm6415-201ENSMUST00000118488 348 ntBASIC13.69□□□□□ -0.22
LdlrP35951 Gm13823-201ENSMUST00000119930 345 ntBASIC13.69□□□□□ -0.22
LdlrP35951 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.69□□□□□ -0.22
LdlrP35951 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.69□□□□□ -0.22
LdlrP35951 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LdlrP35951 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
LdlrP35951 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LdlrP35951 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LdlrP35951 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LdlrP35951 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LdlrP35951 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LdlrP35951 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LdlrP35951 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms