Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.74□□□□□ -0.37
Thbs1P35441 Gm10766-202ENSMUST00000194123 606 ntBASIC12.74□□□□□ -0.37
Thbs1P35441 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Thbs1P35441 Gm44344-201ENSMUST00000200287 129 ntBASIC12.74□□□□□ -0.37
Thbs1P35441 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.74□□□□□ -0.37
Thbs1P35441 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Thbs1P35441 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thbs1P35441 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thbs1P35441 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Thbs1P35441 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thbs1P35441 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Thbs1P35441 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thbs1P35441 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Thbs1P35441 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thbs1P35441 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thbs1P35441 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thbs1P35441 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Thbs1P35441 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.73□□□□□ -0.37
Thbs1P35441 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.73□□□□□ -0.37
Thbs1P35441 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.73□□□□□ -0.37
Thbs1P35441 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Thbs1P35441 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Thbs1P35441 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Thbs1P35441 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Thbs1P35441 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.73□□□□□ -0.37
Thbs1P35441 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thbs1P35441 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Thbs1P35441 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Gm13385-201ENSMUST00000121089 220 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.72□□□□□ -0.37
Thbs1P35441 Gm8927-201ENSMUST00000181978 981 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Gm27618-201ENSMUST00000183671 60 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Thbs1P35441 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Gm42660-201ENSMUST00000197733 947 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.72□□□□□ -0.37
Thbs1P35441 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Gm3222-201ENSMUST00000071282 990 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thbs1P35441 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.72□□□□□ -0.37
Thbs1P35441 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.72□□□□□ -0.37
Thbs1P35441 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms