Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RxrbP28704 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.8□□□□□ -0.2
RxrbP28704 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.8□□□□□ -0.2
RxrbP28704 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.8□□□□□ -0.2
RxrbP28704 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.8□□□□□ -0.2
RxrbP28704 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RxrbP28704 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.8□□□□□ -0.2
RxrbP28704 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
RxrbP28704 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.8□□□□□ -0.2
RxrbP28704 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.8□□□□□ -0.2
RxrbP28704 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.8□□□□□ -0.2
RxrbP28704 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RxrbP28704 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.8□□□□□ -0.2
RxrbP28704 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.8□□□□□ -0.2
RxrbP28704 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RxrbP28704 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RxrbP28704 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
RxrbP28704 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.79□□□□□ -0.2
RxrbP28704 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RxrbP28704 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
RxrbP28704 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RxrbP28704 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.79□□□□□ -0.2
RxrbP28704 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.79□□□□□ -0.2
RxrbP28704 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.79□□□□□ -0.2
RxrbP28704 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.79□□□□□ -0.2
RxrbP28704 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RxrbP28704 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.79□□□□□ -0.2
RxrbP28704 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Pck2-205ENSMUST00000226352 2784 ntBASIC13.78□□□□□ -0.2
RxrbP28704 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RxrbP28704 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RxrbP28704 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.78□□□□□ -0.2
RxrbP28704 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.78□□□□□ -0.2
RxrbP28704 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.78□□□□□ -0.2
RxrbP28704 Gm11025-201ENSMUST00000140773 466 ntBASIC13.78□□□□□ -0.2
RxrbP28704 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.78□□□□□ -0.2
RxrbP28704 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
RxrbP28704 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.78□□□□□ -0.2
RxrbP28704 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Gm45612-201ENSMUST00000211320 160 ntBASIC13.78□□□□□ -0.2
RxrbP28704 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.78□□□□□ -0.2
RxrbP28704 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.78□□□□□ -0.2
RxrbP28704 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RxrbP28704 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.78□□□□□ -0.2
RxrbP28704 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RxrbP28704 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.78□□□□□ -0.2
RxrbP28704 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RxrbP28704 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
RxrbP28704 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RxrbP28704 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RxrbP28704 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms