Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.69□□□□□ -0.22
Nckap1P28660 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nckap1P28660 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nckap1P28660 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Nckap1P28660 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Nckap1P28660 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Nckap1P28660 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Gm11425-201ENSMUST00000119608 498 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.68□□□□□ -0.22
Nckap1P28660 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.68□□□□□ -0.22
Nckap1P28660 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Mir7085-201ENSMUST00000184353 66 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Gm9396-201ENSMUST00000076703 567 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nckap1P28660 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.68□□□□□ -0.22
Nckap1P28660 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.67□□□□□ -0.22
Nckap1P28660 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nckap1P28660 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nckap1P28660 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nckap1P28660 Gm2495-201ENSMUST00000191160 466 ntBASIC13.67□□□□□ -0.22
Nckap1P28660 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.67□□□□□ -0.22
Nckap1P28660 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Gm7287-201ENSMUST00000205267 602 ntBASIC13.67□□□□□ -0.22
Nckap1P28660 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.67□□□□□ -0.22
Nckap1P28660 Gm6983-201ENSMUST00000214912 628 ntBASIC13.67□□□□□ -0.22
Nckap1P28660 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.67□□□□□ -0.22
Nckap1P28660 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.67□□□□□ -0.22
Nckap1P28660 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nckap1P28660 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Nckap1P28660 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nckap1P28660 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.66□□□□□ -0.22
Nckap1P28660 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.66□□□□□ -0.22
Nckap1P28660 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.66□□□□□ -0.22
Nckap1P28660 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.66□□□□□ -0.22
Nckap1P28660 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nckap1P28660 Gm11814-201ENSMUST00000119515 929 ntBASIC13.66□□□□□ -0.22
Nckap1P28660 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms