Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.48□□□□□ -0.57
Col8a2P25318 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Col8a2P25318 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.47□□□□□ -0.57
Col8a2P25318 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.47□□□□□ -0.57
Col8a2P25318 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Col8a2P25318 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.47□□□□□ -0.57
Col8a2P25318 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.47□□□□□ -0.57
Col8a2P25318 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.47□□□□□ -0.57
Col8a2P25318 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.47□□□□□ -0.57
Col8a2P25318 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.47□□□□□ -0.57
Col8a2P25318 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.47□□□□□ -0.57
Col8a2P25318 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Col8a2P25318 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Col8a2P25318 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Col8a2P25318 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.46□□□□□ -0.57
Col8a2P25318 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.46□□□□□ -0.57
Col8a2P25318 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Gm26464-201ENSMUST00000157094 305 ntBASIC11.46□□□□□ -0.57
Col8a2P25318 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.46□□□□□ -0.57
Col8a2P25318 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Gm28911-201ENSMUST00000188837 117 ntBASIC11.46□□□□□ -0.57
Col8a2P25318 Gm18307-201ENSMUST00000206864 949 ntBASIC11.46□□□□□ -0.57
Col8a2P25318 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.46□□□□□ -0.57
Col8a2P25318 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Col8a2P25318 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col8a2P25318 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col8a2P25318 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col8a2P25318 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Col8a2P25318 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col8a2P25318 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col8a2P25318 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Col8a2P25318 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Col8a2P25318 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col8a2P25318 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col8a2P25318 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.45□□□□□ -0.58
Col8a2P25318 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col8a2P25318 Mir698-201ENSMUST00000102164 109 ntBASIC11.45□□□□□ -0.58
Col8a2P25318 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms