Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Hoxc6P10629 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm24526-201ENSMUST00000082921 158 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.18■□□□□ 0.02
Hoxc6P10629 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Hoxc6P10629 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Hoxc6P10629 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Hoxc6P10629 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.18■□□□□ 0.02
Hoxc6P10629 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Gm25261-201ENSMUST00000157416 134 ntBASIC15.17■□□□□ 0.02
Hoxc6P10629 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Gm7029-201ENSMUST00000173226 450 ntBASIC15.17■□□□□ 0.02
Hoxc6P10629 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Gm25927-201ENSMUST00000175058 117 ntBASIC15.17■□□□□ 0.02
Hoxc6P10629 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc6P10629 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc6P10629 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm44364-201ENSMUST00000198368 141 ntBASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Olfr284-202ENSMUST00000206647 966 ntBASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm18056-201ENSMUST00000207670 568 ntBASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm18061-201ENSMUST00000208350 562 ntBASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm18063-201ENSMUST00000208529 568 ntBASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm18052-201ENSMUST00000208750 559 ntBASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm18935-201ENSMUST00000212692 664 ntBASIC15.16■□□□□ 0.02
Hoxc6P10629 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc6P10629 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc6P10629 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms