Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col4a1P02463 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Gm4986-201ENSMUST00000119731 549 ntBASIC16.57■□□□□ 0.24
Col4a1P02463 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Col4a1P02463 Mir7070-201ENSMUST00000183657 86 ntBASIC16.57■□□□□ 0.24
Col4a1P02463 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.57■□□□□ 0.24
Col4a1P02463 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC16.57■□□□□ 0.24
Col4a1P02463 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Col4a1P02463 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col4a1P02463 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Gm25214-201ENSMUST00000104573 129 ntBASIC16.56■□□□□ 0.24
Col4a1P02463 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a1P02463 Gm44364-201ENSMUST00000198368 141 ntBASIC16.56■□□□□ 0.24
Col4a1P02463 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.56■□□□□ 0.24
Col4a1P02463 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.56■□□□□ 0.24
Col4a1P02463 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col4a1P02463 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.56■□□□□ 0.24
Col4a1P02463 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Gm29199-201ENSMUST00000187766 775 ntBASIC16.56■□□□□ 0.24
Col4a1P02463 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Col4a1P02463 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.56■□□□□ 0.24
Col4a1P02463 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
Col4a1P02463 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col4a1P02463 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.55■□□□□ 0.24
Col4a1P02463 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Col4a1P02463 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Col4a1P02463 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm2231-201ENSMUST00000125661 612 ntBASIC16.55■□□□□ 0.24
Col4a1P02463 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm24548-201ENSMUST00000158650 108 ntBASIC16.55■□□□□ 0.24
Col4a1P02463 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.55■□□□□ 0.24
Col4a1P02463 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.55■□□□□ 0.24
Col4a1P02463 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm6082-201ENSMUST00000215204 454 ntBASIC16.55■□□□□ 0.24
Col4a1P02463 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Col4a1P02463 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.55■□□□□ 0.24
Col4a1P02463 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col4a1P02463 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.54■□□□□ 0.24
Col4a1P02463 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.54■□□□□ 0.24
Col4a1P02463 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col4a1P02463 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.54■□□□□ 0.24
Col4a1P02463 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.54■□□□□ 0.24
Col4a1P02463 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col4a1P02463 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.54■□□□□ 0.24
Col4a1P02463 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
Col4a1P02463 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Col4a1P02463 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms