Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.18□□□□□ -0.14
CopeO89079 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CopeO89079 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.18□□□□□ -0.14
CopeO89079 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.18□□□□□ -0.14
CopeO89079 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Gm45612-201ENSMUST00000211320 160 ntBASIC14.18□□□□□ -0.14
CopeO89079 Gm45453-201ENSMUST00000211758 853 ntBASIC14.18□□□□□ -0.14
CopeO89079 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.18□□□□□ -0.14
CopeO89079 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CopeO89079 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CopeO89079 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.18□□□□□ -0.14
CopeO89079 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CopeO89079 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopeO89079 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.17□□□□□ -0.14
CopeO89079 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.17□□□□□ -0.14
CopeO89079 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.17□□□□□ -0.14
CopeO89079 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.17□□□□□ -0.14
CopeO89079 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.17□□□□□ -0.14
CopeO89079 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.17□□□□□ -0.14
CopeO89079 Mir125a-201ENSMUST00000083545 68 ntBASIC14.17□□□□□ -0.14
CopeO89079 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CopeO89079 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CopeO89079 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.17□□□□□ -0.14
CopeO89079 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
CopeO89079 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CopeO89079 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopeO89079 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CopeO89079 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.16□□□□□ -0.14
CopeO89079 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CopeO89079 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.16□□□□□ -0.14
CopeO89079 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CopeO89079 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms