Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm28043E0CXC2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm9824-201ENSMUST00000178707 561 ntBASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm5312-201ENSMUST00000203728 547 ntBASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm18049-201ENSMUST00000208909 581 ntBASIC13.82□□□□□ -0.2
Gm28043E0CXC2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm28043E0CXC2 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm28043E0CXC2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Gm13015-201ENSMUST00000118674 204 ntBASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Gm28043E0CXC2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms