Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.16■□□□□ 0.02
Krt28A6BLY7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Krt28A6BLY7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.15■□□□□ 0.02
Krt28A6BLY7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC15.15■□□□□ 0.02
Krt28A6BLY7 Gm11591-201ENSMUST00000120063 702 ntBASIC15.15■□□□□ 0.02
Krt28A6BLY7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.15■□□□□ 0.02
Krt28A6BLY7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt28A6BLY7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm12403-201ENSMUST00000121384 959 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.14■□□□□ 0.01
Krt28A6BLY7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt28A6BLY7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms