Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm15173-201ENSMUST00000122049 433 ntBASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ank2-226ENSMUST00000189368 339 ntBASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm45167-201ENSMUST00000208007 322 ntBASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.42□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav3n-3A0A0G2JEM0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms