Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.72□□□□□ -0.37
ClcnkaQ9WUB7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Gm27680-201ENSMUST00000184192 160 ntBASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Gm37714-201ENSMUST00000194742 342 ntBASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Gm44872-201ENSMUST00000207864 420 ntBASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
ClcnkaQ9WUB7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
ClcnkaQ9WUB7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Gm15460-201ENSMUST00000118147 391 ntBASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Gm15920-201ENSMUST00000118998 402 ntBASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
ClcnkaQ9WUB7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ClcnkaQ9WUB7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms