Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Gm11524-201ENSMUST00000119349 807 ntBASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.24□□□□□ -0.29
Upk3aQ9JKX8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Gm12859-201ENSMUST00000117834 427 ntBASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Gm12485-201ENSMUST00000119641 291 ntBASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Gm19220-201ENSMUST00000222682 803 ntBASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Gm5161-201ENSMUST00000075243 853 ntBASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk3aQ9JKX8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Gm17330-201ENSMUST00000221047 165 ntBASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Upk3aQ9JKX8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms