Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trim42Q9D2H5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Gm12882-201ENSMUST00000121696 517 ntBASIC13.79□□□□□ -0.2
Trim42Q9D2H5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Gm27459-201ENSMUST00000184860 107 ntBASIC13.79□□□□□ -0.2
Trim42Q9D2H5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim42Q9D2H5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Gm25007-201ENSMUST00000083808 133 ntBASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim42Q9D2H5 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms