Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm45453-201ENSMUST00000211758 853 ntBASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snf8Q9CZ28 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Rubie-203ENSMUST00000227803 2430 ntBASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snf8Q9CZ28 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gm27631-201ENSMUST00000184163 466 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gm37714-201ENSMUST00000194742 342 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Mir125a-201ENSMUST00000083545 68 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gm10175-201ENSMUST00000086013 645 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snf8Q9CZ28 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms