Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim34aQ99PP6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Gm43179-201ENSMUST00000198797 275 ntBASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Gm7399-201ENSMUST00000032395 858 ntBASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trim34aQ99PP6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim34aQ99PP6 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim34aQ99PP6 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trim34aQ99PP6 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm11400-201ENSMUST00000120853 1214 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm12403-201ENSMUST00000121384 959 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trim34aQ99PP6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms