Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Gm7857-201ENSMUST00000117957 358 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Gm37489-201ENSMUST00000191883 159 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Gm5051-201ENSMUST00000204085 485 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col25a1Q99MQ5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm14130-201ENSMUST00000118417 987 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm4271-201ENSMUST00000174444 973 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col25a1Q99MQ5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Gm27023-201ENSMUST00000182372 285 ntBASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col25a1Q99MQ5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms