Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Gm22175-201ENSMUST00000175007 78 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Gm46209-201ENSMUST00000217912 553 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Pcdhb8Q91XZ2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gm15460-201ENSMUST00000118147 391 ntBASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gm9229-201ENSMUST00000222777 126 ntBASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb8Q91XZ2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gm27618-201ENSMUST00000183671 60 ntBASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb8Q91XZ2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb8Q91XZ2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb8Q91XZ2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb8Q91XZ2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb8Q91XZ2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb8Q91XZ2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms