Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh18Q8VHR0 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Gm44492-201ENSMUST00000197012 141 ntBASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Gm18206-201ENSMUST00000207027 926 ntBASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.3□□□□□ -0.28
Pcdh18Q8VHR0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Gm5479-201ENSMUST00000160578 435 ntBASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Mir8117-201ENSMUST00000184773 107 ntBASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh18Q8VHR0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh18Q8VHR0 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms